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Bioinformatics for Principal Investigators

Description

The aim of this workshop is to introduce principal investigators to the challenges of working with biological data, to provide guidance on how to manage such data and to encourage the development of bioinformatics skills in their team.

 

Prerequisites

Principal Investigators from the University of Cambridge, Affiliated Institutions and other external Institutions who are using or planning to use bioinformatics in their research.

 

For additional information, follow this link.

 

Timetable

Day 1
9:00-9:10 Welcome Anne Ferguson Smith, University of Cambridge
9:10-10:00 Data challenges in the life-sciences Niklas Blomberg, ELIXIR
10:00-10:30 Tea/coffee break
10:30-11:30 Using bioinformatics in research – what to do and what not to do Nicholas Luscombe, Francis Crick Institute
11:30-12:30 Using bioinformatics in research – the importance of planning John Marioni, CRUK-CI
12:30-13:30 Lunch
13:30-14:30 The importance of managing data quality and content Simon Andrews, Babraham Institute
14:30-15:30 What computational resources do you need to access? Matthew Eldridge, CRUK-CI
15:30-16:00 Tea/coffee break
16:00-17:00 Bioinformatics workflow example 1 - RNA-seq John Marioni, CRUK-CI
17:00-19:00 Wrap up followed by drink reception
Day 2
9:30-10:30 Describing your data – standards and ontologies Helen Parkinson, EMBL-EBI
10:30-11:00 Tea/coffee break
11:00-12:00 Bioinformatics workflow example 2 - variant calling Ignacio Medina, University of Cambridge
12:00-13:00 Data integration – challenges and promises Oliver Stegle, EMBL-EBI
13:00-14:00 Lunch
14:00-15:30 Planning your data management Marta Teperek, University of Cambridge
15:30-15:45 Tea/coffee break
15:45-16:30 Building your team competencies  - what does your team need and how does your team gain them? Sarah Morgan, EMBL-EBI & Gabriella Rustici, University of Cambridge
16:30-17:00 Final discussion
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