Biologist/bioinformatician with over 10 years experience working with InterMine and complex biological data, she forms the liaison between the biology and the software development.
Publications
Key publications:
HumanMine: advanced data searching, analysis and cross-species comparison
Database
2022-07-12 | Journal article
Contributors: Rachel Lyne; Adrián Bazaga; Daniela Butano; Sergio Contrino; Joshua Heimbach; Fengyuan Hu; Alexis Kalderimis; Mike Lyne; Kevin Reierskog; Radek Stepan et al.
HumanMine: advanced data searching, analysis and cross-species comparison
2022-05-12 | Preprint
Contributors: Rachel Lyne; Adrián Bazaga; Daniela Butano; Sergio Contrino; Joshua Heimbach; Fengyuan Hu; Alexis Kalderimis; Mike Lyne; Kevin Reierskog; Radek Stepan et al.
Insights into olfactory ensheathing cell development from a laser‐microdissection and transcriptome‐profiling approach
Glia
2020-12-28 | Journal article
DOI: 10.1002/glia.23870
Contributors: Surangi N. Perera; Ruth M. Williams; Rachel Lyne; Oliver Stubbs; Dennis P. Buehler; Tatjana Sauka‐Spengler; Masaharu Noda; Gos Micklem; E. Michelle Southard‐Smith; Clare V. H. Baker
InterMineR: an R package for InterMine databases
Bioinformatics
2019-09-01 | Journal article
Contributors: Konstantinos A Kyritsis; Bing Wang; Julie Sullivan; Rachel Lyne; Gos Micklem; Janet Kelso
The InterMine Android app: Cross-organism genomic data in your pocket
F1000Research
2019-06-07 | Journal article
Contributors: Daria Komkova; Rachel Lyne; Julie Sullivan; Yo Yehudi; Gos Micklem
The InterMine Android app: Cross-organism genomic data in your pocket [version 1; referees: 1 approved, 1 approved with reservations]
2018-11-22 | Journal article
Teaching and Supervisions
Teaching:
2020/2021:
- Biological data analysis using the InterMine User Interface - Trainer
- Biological data analysis using the InterMine API - Trainer
2018/2019:
- Biological data analysis using the InterMine API - Trainer
- Biological data analysis using InterMine - Trainer
2017/2018:
- Biological data analysis using InterMine - Trainer
2016/2017:
- Biological data analysis using InterMine - Trainer
2015/2016:
- Biological data analysis using InterMine - Trainer
