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Foundational skills overview Data analysis in Python Data analysis in R Fundamentals of Python Programming Reproducible Research Scientific Figure Design AI Prompting for Biologists

Bioinformatics

Bioinformatics overview Building Computational Pipelines with Nextflow Bulk RNA-seq analysis Expression Proteomics Analysis in R Extracting Biological Information from Gene Lists Foundations of Phylogenetic Inference Introduction to the Unix Command Line Managing Bioinformatics Software and Pipelines Metabolomics Data Analysis Metagenomics Data Analysis Protein Structure Prediction and Analysis Quality Control in Sequencing Experiments Single-cell RNA-seq analysis Spatial Transcriptomics Analysis Working on HPC clusters Working with Bacterial Genomes

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Applied Statistics overview Bayesian inference Core statistics Experimental design for stats Generalised linear models Linear mixed effects models

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Machine Learning overview Principles of Machine Learning

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Eliot Ragueneau

Eliot Ragueneau

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EMBL-EBI

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EMBL’s European Bioinformatics Institute (EMBL-EBI)

About

Senior Software Engineer

2021 - 2024:

Network Analysis with Cytoscape - Trainer

Research Informatics Training

Contact Information

University of Cambridge Department of Genetics Downing Street, Cambridge CB2 3EH

bioinfotraining@bio.cam.ac.uk

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