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Research Informatics Training
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-- Foundational skills
-- Foundational skills overview
Data analysis in Python
Data analysis in R
Fundamentals of Python Programming
Reproducible Research
Scientific Figure Design
AI Prompting for Biologists
-- Bioinformatics
-- Bioinformatics overview
Building Computational Pipelines with Nextflow
Bulk RNA-seq analysis
Expression Proteomics Analysis in R
Extracting Biological Information from Gene Lists
Foundations of Phylogenetic Inference
Introduction to the Unix Command Line
Managing Bioinformatics Software and Pipelines
Metabolomics Data Analysis
Metagenomics Data Analysis
Protein Structure Prediction and Analysis
Quality Control in Sequencing Experiments
Single-cell RNA-seq analysis
Spatial Transcriptomics Analysis
Working on HPC clusters
Working with Bacterial Genomes
-- Applied Statistics
-- Applied Statistics overview
Bayesian inference
Core statistics
Experimental design for stats
Generalised linear models
Linear mixed effects models
-- Machine Learning
-- Machine Learning overview
Principles of Machine Learning
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Jorge Batista da Rocha, PhD
Research Informatics Training
Events
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Ensembl Outreach Project Leader
2024 - 2025:
Using the Ensembl Genome Browser - Trainer
Ensembl REST API workshop - Trainer
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