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Research Informatics Training

 

Senior Scientific Database Curator

Publications

Key publications: 

The IntAct database: efficient access to fine-grained molecular interaction data.

Del Toro N, Shrivastava A, Ragueneau E, Meldal B, Combe C, Barrera E, Perfetto L, How K, Ratan P, Shirodkar G, Lu O, Mészáros B, Watkins X, Pundir S, Licata L, Iannuccelli M, Pellegrini M, Martin MJ, Panni S, Duesbury M, Vallet SD, Rappsilber J, Ricard-Blum S, Cesareni G, Salwinski L, Orchard S, Porras P, Panneerselvam K, Hermjakob H.

Nucleic Acids Res, 2022

doi:10.1093/nar/gkab1006.


Complex Portal 2022: new curation frontiers.

Meldal BHM, Perfetto L, Combe C, Lubiana T, Ferreira Cavalcante JV, Bye-A-Jee H, Waagmeester A, Del-Toro N, Shrivastava A, Barrera E, Wong E, Mlecnik B, Bindea G, Panneerselvam K, Willighagen E, Rappsilber J, Porras P, Hermjakob H, Orchard S.

Nucleic Acids Res, 2022

doi:10.1093/nar/gkab991.


Towards a unified open access dataset of molecular interactions.

Porras P, Barrera E, Bridge A, Del-Toro N, Cesareni G, Duesbury M, Hermjakob H, Iannuccelli M, Jurisica I, Kotlyar M, Licata L, Lovering RC, Lynn DJ, Meldal B, Nanduri B, Paneerselvam K, Panni S, Pastrello C, Pellegrini M, Perfetto L, Rahimzadeh N, Ratan P, Ricard-Blum S, Salwinski L, Shirodkar G, Shrivastava A, Orchard S.

Nat Commun, 2020

doi:10.1038/s41467-020-19942-z.


The IMEx coronavirus interactome: an evolving map of Coronaviridae-host molecular interactions.

Perfetto L, Pastrello C, Del-Toro N, Duesbury M, Iannuccelli M, Kotlyar M, Licata L, Meldal B, Panneerselvam K, Panni S, Rahimzadeh N, Ricard-Blum S, Salwinski L, Shrivastava A, Cesareni G, Pellegrini M, Orchard S, Jurisica I, Hermjakob H, Porras P.

Database (Oxford), 2020

doi:10.1093/database/baaa096.

Teaching and Supervisions

Teaching: 

 

2023/2024:

  • Network Analysis with Cytoscape - Training Lead

2022/2023:

  • Network Analysis with Cytoscape - Training Lead

2021/2022:

  • Network Analysis with Cytoscape - Training Lead, Trainer

2020/2021:

  • Network Analysis with Cytoscape - Trainer
kalpana paneerselvam

Contact Details

Email address: 
EMBL’s European Bioinformatics Institute (EMBL-EBI)
Wellcome Genome Campus
Hinxton
Cambridgeshire
CB10 1SD
United Kingdom